- O - Static variable in class kineticMonteCarlo.atom.CatalysisAtom
-
- O2 - Static variable in class kineticMonteCarlo.atom.CatalysisAtom
-
- obtainRateFromNeighbours() - Method in class kineticMonteCarlo.atom.AbstractGrowthAtom
-
- obtainRateFromNeighbours() - Method in class kineticMonteCarlo.atom.AgAtom
-
- obtainRateFromNeighbours() - Method in class kineticMonteCarlo.atom.BasicGrowthAtom
-
- obtainRateFromNeighbours() - Method in class kineticMonteCarlo.atom.CatalysisAtom
-
- obtainRateFromNeighbours() - Method in class kineticMonteCarlo.atom.GrapheneAtom
-
- occupied - Variable in class kineticMonteCarlo.atom.AbstractAtom
-
- occupied - Variable in class kineticMonteCarlo.lattice.AbstractGrowthLattice
-
- occupied - Variable in class utils.list.atoms.AtomsAvlTree
-
How much is the occupancy of the tree.
- occupiedNeighbours - Variable in class kineticMonteCarlo.atom.AbstractGrowthAtom
-
- occupiedNeighbours - Variable in class kineticMonteCarlo.atom.CatalysisAtom
-
- offFitness - Variable in class geneticAlgorithm.Population
-
Objective function values.
- offspringGenes - Variable in class geneticAlgorithm.Population
-
Offspring population.
- offspringSize - Variable in class basic.Parser
-
- offspringSize - Variable in class geneticAlgorithm.AbstractGeneticAlgorithm
-
- ones(int, int) - Static method in class utils.akting.RichMatrix
-
- oneSec() - Static method in class utils.Wait
-
Waits one second
- onlyOneNeighbourInCommon(AbstractGrowthAtom, AbstractGrowthAtom) - Method in class kineticMonteCarlo.lattice.AbstractGrowthLattice
-
Edge diffusion can only happen when two atoms are in an edge.
- Operation - Interface in utils.akting.operations
-
- OperationFactory - Class in utils.akting.operations
-
- OperationFactory() - Constructor for class utils.akting.operations.OperationFactory
-
- ORANGE - Static variable in class graphicInterfaces.growth.KmcCanvas
-
- order() - Method in class geneticAlgorithm.Population
-
Orders the population, from the least to the more error.
- order - Variable in class graphicInterfaces.etching.SiPointArray
-
- orderByAngle(List<AbstractGrowthAtom>, int) - Static method in class utils.QuickSort
-
- orderByAngle(List<AbstractGrowthAtom>, int, int) - Static method in class utils.QuickSort
-
- ordered - Variable in class geneticAlgorithm.Population
-
- otherEvaluators - Variable in class geneticAlgorithm.AbstractGeneticAlgorithm
-
- outBounds - Variable in class geneticAlgorithm.recombination.RealRecombination
-
- outCatalysis - Variable in class basic.io.Restart
-
- outData - Variable in class basic.io.Restart
-
- outDataAe - Variable in class basic.io.Restart
-
- outDataFormat - Variable in class basic.io.Restart
-
- outDeltaAttachments - Variable in class basic.io.Restart
-
- outerPerimeter - Variable in class kineticMonteCarlo.atom.AbstractGrowthAtom
-
- outerPerimeter - Variable in class kineticMonteCarlo.lattice.AbstractGrowthLattice
-
- outPerAtom - Variable in class basic.io.Restart
-
- outputAe - Variable in class kineticMonteCarlo.kmcCore.catalysis.CatalysisKmc
-
Activation energy output during the execution
- outputAeTotal - Variable in class kineticMonteCarlo.kmcCore.catalysis.CatalysisKmc
-
- outputData - Variable in class basic.Parser
-
- outputData() - Method in class basic.Parser
-
Chooses to output data or not.
- outputData - Variable in class kineticMonteCarlo.kmcCore.catalysis.CatalysisKmc
-
- outputDataFormat - Variable in class basic.Parser
-
- outputEvery - Variable in class basic.Parser
-
See {@link #getOutputEvery()].
- outputEvery - Variable in class kineticMonteCarlo.kmcCore.catalysis.CatalysisKmc
-
- OutputType - Class in basic.io
-
- OutputType() - Constructor for class basic.io.OutputType
-
- outputType - Variable in class basic.Parser
-
- OutputType.formatFlag - Enum in basic.io
-
- outside - Variable in class kineticMonteCarlo.atom.AbstractGrowthAtom
-
- outTof - Variable in class basic.io.Restart
-
- overlayText - Variable in class graphicInterfaces.etching.Canvas3DOverlay
-