Uses of Class
kineticMonteCarlo.atom.CatalysisAtom

Packages that use CatalysisAtom

Package	Description
kineticMonteCarlo.atom
kineticMonteCarlo.kmcCore.catalysis
kineticMonteCarlo.kmcCore.growth
kineticMonteCarlo.lattice
kineticMonteCarlo.unitCell

Uses of CatalysisAtom in kineticMonteCarlo.atom

Fields in kineticMonteCarlo.atom declared as CatalysisAtom

Modifier and Type	Field and Description
private CatalysisAtom[]	CatalysisAtom.neighbours

Methods in kineticMonteCarlo.atom that return CatalysisAtom

Modifier and Type	Method and Description
CatalysisAtom	CatalysisAtom.getNeighbour(int pos)
CatalysisAtom	CatalysisAtom.getRandomNeighbour(byte process)

Uses of CatalysisAtom in kineticMonteCarlo.kmcCore.catalysis

Methods in kineticMonteCarlo.kmcCore.catalysis that return CatalysisAtom

Modifier and Type	Method and Description
private CatalysisAtom	CatalysisKmc.depositNewAtom()

Methods in kineticMonteCarlo.kmcCore.catalysis with parameters of type CatalysisAtom

Modifier and Type	Method and Description
private boolean	CatalysisKmc.depositAtom(CatalysisAtom atom)
private double	CatalysisKmc.getDesorptionProbability(CatalysisAtom atom, CatalysisAtom neighbour) Computes desorption probability.
(package private) double	CatalysisFarkasKmc.getDesorptionRate(CatalysisAtom atom)
(package private) double	CatalysisKmc.getDesorptionRate(CatalysisAtom atom) Computes desorption probability.
(package private) double	CatalysisFarkasKmc.getDiffusionRate(CatalysisAtom atom, CatalysisAtom neighbour)
(package private) double	CatalysisKmc.getDiffusionRate(CatalysisAtom atom, CatalysisAtom neighbour)
(package private) double	CatalysisFarkasKmc.getReactionRate(CatalysisAtom atom, CatalysisAtom neighbour) One atom is O and the other CO, for sure.
(package private) double	CatalysisKmc.getReactionRate(CatalysisAtom atom, CatalysisAtom neighbour) One atom is O and the other CO, for sure.
private void	CatalysisKmc.recomputeAdsorptionProbability(CatalysisAtom atom)
private void	CatalysisKmc.recomputeCollection(byte process, CatalysisAtom atom, double oldRate)
private void	CatalysisKmc.recomputeDesorptionProbability(CatalysisAtom atom)
private void	CatalysisKmc.recomputeDiffusionProbability(CatalysisAtom atom)
private void	CatalysisKmc.recomputeReactionProbability(CatalysisAtom atom)
private void	CatalysisKmc.updateRates(CatalysisAtom atom) Updates total adsorption, desorption, reaction and diffusion probabilities.

Uses of CatalysisAtom in kineticMonteCarlo.kmcCore.growth

Method parameters in kineticMonteCarlo.kmcCore.growth with type arguments of type CatalysisAtom

Modifier and Type	Method and Description
void	ActivationEnergy.updatePossibles(java.util.Iterator<CatalysisAtom> surface, double elapsedTime, boolean stationary) Computes possibles for catalysis.

Uses of CatalysisAtom in kineticMonteCarlo.lattice

Methods in kineticMonteCarlo.lattice that return CatalysisAtom

Modifier and Type	Method and Description
private CatalysisAtom[][]	CatalysisLattice.createAtoms()
CatalysisAtom	CatalysisLattice.getCentralAtom()

Methods in kineticMonteCarlo.lattice with parameters of type CatalysisAtom

Modifier and Type	Method and Description
private void	CatalysisLattice.updateCoCus(CatalysisAtom atom) Check whether two CO^CUS atoms are together.

Uses of CatalysisAtom in kineticMonteCarlo.unitCell

Fields in kineticMonteCarlo.unitCell declared as CatalysisAtom

Modifier and Type	Field and Description
private CatalysisAtom	CatalysisUc.atom

Methods in kineticMonteCarlo.unitCell that return CatalysisAtom

Modifier and Type	Method and Description
CatalysisAtom	CatalysisUc.getAtom(int pos) Always returns the current atom

Constructors in kineticMonteCarlo.unitCell with parameters of type CatalysisAtom

Constructor and Description
CatalysisUc(int posI, int posJ, CatalysisAtom atom)